Pseudomonas syringae pv. tomato DC3000, PSPTO_0353 (ntrB)

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_0353
NCBI Old Locus Tag	PSPTO0353
Name	ntrB Synonym: PSPTO0353
Replicon	chromosome
Genomic location	386144 - 387229 (- strand)

Cross-References

RefSeq	NP_790202.1
GI	28867583
Entrez	1181962
INSDC	AAO53897.1
NCBI Locus Tag	PSPTO_0353
NCBI Old Locus Tag	PSPTO0353
UniParc	UPI00000083DD
UniProtKB Acc	Q88AN5
UniProtKB ID	Q88AN5_PSESM
UniRef100	UniRef100_Q88AN5
UniRef50	UniRef50_Q4KJR1
UniRef90	UniRef90_Q4KJR1

Product

Feature Type	CDS
Coding Frame	1
Product Name	nitrogen regulation protein NtrB
Synonyms
Evidence for Translation
Charge (pH 7)	-5.43
Kyte-Doolittle Hydrophobicity Value	-0.090
Molecular Weight (kDa)	40.0
Isoelectric Point (pI)	6.14

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 608 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG004717 (535 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_0353 Search term: ntrB Search term: nitrogen regulation protein NtrB

Human Homologs

References