Pseudomonas syringae pv. tomato DC3000, PSPTO_0220

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_0220
NCBI Old Locus Tag	PSPTO0220
Name	Synonym: PSPTO0220
Replicon	chromosome
Genomic location	242831 - 243160 (+ strand)

Cross-References

RefSeq	NP_790071.1
GI	28867452
Entrez	1181828
INSDC	AAO53766.1
NCBI Locus Tag	PSPTO_0220
NCBI Old Locus Tag	PSPTO0220
UniParc	UPI000000835C
UniProtKB Acc	Q88B13
UniProtKB ID	Q88B13_PSESM
UniRef100	UniRef100_Q88B13
UniRef50	UniRef50_Q500B2
UniRef90	UniRef90_Q88B13

Product

Feature Type	CDS
Coding Frame	1
Product Name	hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7)	-18.00
Kyte-Doolittle Hydrophobicity Value	-0.928
Molecular Weight (kDa)	11.5
Isoelectric Point (pI)	3.87

Subcellular localization

Individual Mappings	Localization Confidence PMID Unknown Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 9 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG004862 (536 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_0220

Human Homologs

References