Pseudomonas syringae pv. tomato DC3000, PSPTO_0002 (dnaN)

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_0002
NCBI Old Locus Tag	PSPTO0002
Name	dnaN Synonym: PSPTO0002
Replicon	chromosome
Genomic location	1913 - 3016 (+ strand)

Cross-References

RefSeq	NP_789864.1
GI	28867245
Entrez	1181610
INSDC	AAO53559.1
NCBI Locus Tag	PSPTO_0002
NCBI Old Locus Tag	PSPTO0002
UniParc	UPI0000008299
UniProtKB Acc	Q88BK2
UniProtKB ID	Q88BK2_PSESM
UniRef100	UniRef100_Q88BK2
UniRef50	UniRef50_P0A990
UniRef90	UniRef90_P0A120

Product

Feature Type	CDS
Coding Frame	1
Product Name	DNA polymerase III subunit beta
Synonyms
Evidence for Translation
Charge (pH 7)	-10.60
Kyte-Doolittle Hydrophobicity Value	-0.125
Molecular Weight (kDa)	40.7
Isoelectric Point (pI)	4.89

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 587 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000002 (538 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_0002 Search term: dnaN Search term: DNA polymerase III subunit beta

Human Homologs

References