Pseudomonas mendocina NK-01, MDS_4607

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_4607
Name
Replicon chromosome
Genomic location 5043544 - 5044536 (+ strand)

Cross-References

RefSeq YP_004382390.1
GI 330505521
Entrez 10459389
INSDC AEB60638.1
NCBI Locus Tag MDS_4607
UniParc UPI000206D946
UniProtKB Acc F4DPZ5
UniProtKB ID F4DPZ5_PSEMN
UniRef100 UniRef100_F4DPZ5
UniRef50 UniRef50_A3QCW5
UniRef90 UniRef90_A4Y0C6

Product

Feature Type CDS
Coding Frame 1
Product Name
TRAP dicarboxylate transporter subunit DctP
Synonyms
Evidence for Translation
Charge (pH 7) -2.34
Kyte-Doolittle Hydrophobicity Value -0.261
Molecular Weight (kDa) 36.6
Isoelectric Point (pI) 6.41

Subcellular localization

Individual Mappings
Localization Confidence PMID
Periplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 252 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000851 (1023 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_4607

Human Homologs

References

No references are associated with this feature.