Pseudomonas mendocina NK-01, MDS_4596

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_4596
Name
Replicon chromosome
Genomic location 5028409 - 5029098 (+ strand)

Cross-References

RefSeq YP_004382379.1
GI 330505510
Entrez 10459378
INSDC AEB60627.1
NCBI Locus Tag MDS_4596
UniParc UPI000206E61A
UniProtKB Acc F4DPY4
UniProtKB ID F4DPY4_PSEMN
UniRef100 UniRef100_F4DPY4
UniRef50 UniRef50_I3TQ90
UniRef90 UniRef90_F4DPY4

Product

Feature Type CDS
Coding Frame 1
Product Name
polar amino acid ABC transporter permease
Synonyms
Evidence for Translation
Charge (pH 7) 7.64
Kyte-Doolittle Hydrophobicity Value 0.673
Molecular Weight (kDa) 25854.6
Isoelectric Point (pI) 9.71

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 445 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004747 (526 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_4596

Human Homologs

References

No references are associated with this feature.