Pseudomonas mendocina NK-01, MDS_4575

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_4575
Name
Replicon chromosome
Genomic location 5009226 - 5009711 (- strand)

Cross-References

RefSeq YP_004382358.1
GI 330505489
Entrez 10459357
INSDC AEB60606.1
NCBI Locus Tag MDS_4575
UniParc UPI000206E606
UniProtKB Acc F4DPW3
UniProtKB ID F4DPW3_PSEMN
UniRef100 UniRef100_F4DPW3
UniRef50 UniRef50_A6VLB7
UniRef90 UniRef90_A4Y074

Product

Feature Type CDS
Coding Frame 1
Product Name
preprotein translocase subunit SecB
Synonyms
Evidence for Translation
Charge (pH 7) -7.32
Kyte-Doolittle Hydrophobicity Value -0.093
Molecular Weight (kDa) 17.6
Isoelectric Point (pI) 4.49

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 216 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004721 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_4575

Human Homologs

References

No references are associated with this feature.