Pseudomonas mendocina NK-01, MDS_4449

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_4449
Name
Replicon chromosome
Genomic location 4880846 - 4881172 (- strand)

Cross-References

RefSeq YP_004382232.1
GI 330505363
Entrez 10459231
INSDC AEB60480.1
NCBI Locus Tag MDS_4449
UniParc UPI000206E366
UniProtKB Acc F4DN69
UniProtKB ID F4DN69_PSEMN
UniRef100 UniRef100_F4DN69
UniRef50 UniRef50_C5B1G1
UniRef90 UniRef90_A4XZW1

Product

Feature Type CDS
Coding Frame 1
Product Name
sarcosine oxidase subunit delta
Synonyms
Evidence for Translation
Charge (pH 7) -4.21
Kyte-Doolittle Hydrophobicity Value -0.473
Molecular Weight (kDa) 12.3
Isoelectric Point (pI) 6.06

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 72 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004971 (511 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_4449

Human Homologs

References

No references are associated with this feature.