Pseudomonas mendocina NK-01, MDS_4442

Gene Feature Overview

Strain	Pseudomonas mendocina NK-01 GCF_000204295.1|latest
Locus Tag	MDS_4442
Name
Replicon	chromosome
Genomic location	4870608 - 4871342 (+ strand)

Cross-References

RefSeq	YP_004382225.1
GI	330505356
Entrez	10459224
INSDC	AEB60473.1
NCBI Locus Tag	MDS_4442
UniParc	UPI000206E2B2
UniProtKB Acc	F4DN62
UniProtKB ID	F4DN62_PSEMN
UniRef100	UniRef100_F4DN62
UniRef50	UniRef50_Q9HZS1
UniRef90	UniRef90_F6AAB2

Product

Feature Type	CDS
Coding Frame	1
Product Name	glutamate/aspartate ABC transporter ATP-binding protein
Synonyms
Evidence for Translation
Charge (pH 7)	-1.23
Kyte-Doolittle Hydrophobicity Value	-0.083
Molecular Weight (kDa)	26.9
Isoelectric Point (pI)	6.71

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 669 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG001274 (527 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: MDS_4442 Search term: glutamate/aspartate ABC transporter ATP-binding protein

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000301732 ATP binding cassette subfamily A member 3 [Source:HGNC Symbol;Acc:HGNC:33] E-value: 1.4e-15 Percent Identity: 27.6
Ensembl 110, assembly GRCh38.p14	ENSP00000371818 ATP binding cassette subfamily A member 3 [Source:HGNC Symbol;Acc:HGNC:33] E-value: 1.4e-15 Percent Identity: 27.6

References