Pseudomonas mendocina NK-01, MDS_4099

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_4099
Name
Replicon chromosome
Genomic location 4502751 - 4503926 (- strand)

Cross-References

RefSeq YP_004381882.1
GI 330505013
Entrez 10458881
INSDC AEB60130.1
NCBI Locus Tag MDS_4099
UniParc UPI000206D9FF
UniProtKB Acc F4DXR8
UniProtKB ID F4DXR8_PSEMN
UniRef100 UniRef100_F4DXR8
UniRef50 UniRef50_Q4K5G7
UniRef90 UniRef90_W6RJY6

Product

Feature Type CDS
Coding Frame 1
Product Name
serine-type D-Ala-D-Ala carboxypeptidase
Synonyms
Evidence for Translation
Charge (pH 7) -6.10
Kyte-Doolittle Hydrophobicity Value -0.068
Molecular Weight (kDa) 42.6
Isoelectric Point (pI) 5.64

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 383 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001684 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_4099

Human Homologs

References

No references are associated with this feature.