Pseudomonas mendocina NK-01, MDS_3982

Gene Feature Overview

Strain	Pseudomonas mendocina NK-01 GCF_000204295.1|latest
Locus Tag	MDS_3982
Name
Replicon	chromosome
Genomic location	4388969 - 4390189 (- strand)

Cross-References

RefSeq	YP_004381765.1
GI	330504896
Entrez	10458764
INSDC	AEB60013.1
NCBI Locus Tag	MDS_3982
UniParc	UPI000206E4F0
UniProtKB Acc	F4DWR1
UniProtKB ID	F4DWR1_PSEMN
UniRef100	UniRef100_F4DWR1
UniRef50	UniRef50_Q5ZS70
UniRef90	UniRef90_A4XYL2

Product

Feature Type	CDS
Coding Frame	1
Product Name	GTPase ObgE
Synonyms
Evidence for Translation
Charge (pH 7)	-20.03
Kyte-Doolittle Hydrophobicity Value	-0.367
Molecular Weight (kDa)	44451.5
Isoelectric Point (pI)	4.51

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 667 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG004225 (535 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: MDS_3982 Search term: GTPase ObgE

Human Homologs

Ensembl 110, assembly GRCh38.p14

ENSP00000359859 mitochondrial ribosome associated GTPase 2 [Source:HGNC Symbol;Acc:HGNC:16239] E-value: 3.8e-50 Percent Identity: 40.7

References