Pseudomonas mendocina NK-01, MDS_3925

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_3925
Name
Replicon chromosome
Genomic location 4320302 - 4323523 (- strand)

Cross-References

RefSeq YP_004381708.1
GI 330504839
Entrez 10458707
INSDC AEB59956.1
NCBI Locus Tag MDS_3925
UniParc UPI000206E354
UniProtKB Acc F4DVW6
UniProtKB ID F4DVW6_PSEMN
UniRef100 UniRef100_F4DVW6
UniRef50 UniRef50_P00968
UniRef90 UniRef90_P38100

Product

Feature Type CDS
Coding Frame 1
Product Name
carbamoyl phosphate synthase large subunit
Synonyms
Evidence for Translation
Charge (pH 7) -32.68
Kyte-Doolittle Hydrophobicity Value -0.081
Molecular Weight (kDa) 117236.4
Isoelectric Point (pI) 4.78

Subcellular localization

Individual Mappings
Localization Confidence PMID
Periplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 621 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004401 (534 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_3925

Human Homologs

Ensembl 110, assembly GRCh38.p14
carbamoyl-phosphate synthase 1 [Source:HGNC Symbol;Acc:HGNC:2323]
E-value: 1.9e-226
Percent Identity: 40.4
Ensembl 110, assembly GRCh38.p14
carbamoyl-phosphate synthase 1 [Source:HGNC Symbol;Acc:HGNC:2323]
E-value: 1.9e-226
Percent Identity: 40.4
Ensembl 110, assembly GRCh38.p14
carbamoyl-phosphate synthase 1 [Source:HGNC Symbol;Acc:HGNC:2323]
E-value: 1.9e-226
Percent Identity: 40.4
Ensembl 110, assembly GRCh38.p14
carbamoyl-phosphate synthase 1 [Source:HGNC Symbol;Acc:HGNC:2323]
E-value: 1.9e-226
Percent Identity: 40.4
Ensembl 110, assembly GRCh38.p14
carbamoyl-phosphate synthase 1 [Source:HGNC Symbol;Acc:HGNC:2323]
E-value: 1.9e-226
Percent Identity: 40.4

References

No references are associated with this feature.