Pseudomonas mendocina NK-01, MDS_3677

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_3677
Name
Replicon chromosome
Genomic location 4050229 - 4051332 (- strand)

Cross-References

RefSeq YP_004381460.1
GI 330504591
Entrez 10458459
INSDC AEB59708.1
NCBI Locus Tag MDS_3677
UniParc UPI000206DCD7
UniProtKB Acc F4DTE2
UniProtKB ID F4DTE2_PSEMN
UniRef100 UniRef100_F4DTE2
UniRef50 UniRef50_Q4KHJ5
UniRef90 UniRef90_A4XXN7

Product

Feature Type CDS
Coding Frame 1
Product Name
RND family efflux transporter MFP subunit
Synonyms
Evidence for Translation
Charge (pH 7) -0.53
Kyte-Doolittle Hydrophobicity Value -0.322
Molecular Weight (kDa) 40.2
Isoelectric Point (pI) 6.59

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown (This protein may have multiple localization sites) Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 439 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000154 (998 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_3677

Human Homologs

References

No references are associated with this feature.