Pseudomonas mendocina NK-01, MDS_3380

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_3380
Name
Replicon chromosome
Genomic location 3739809 - 3740042 (+ strand)

Cross-References

RefSeq YP_004381163.1
GI 330504294
Entrez 10458162
INSDC AEB59411.1
NCBI Locus Tag MDS_3380
UniParc UPI000206E32E
UniProtKB Acc F4DPU9
UniProtKB ID F4DPU9_PSEMN
UniRef100 UniRef100_F4DPU9
UniRef50 UniRef50_W6QTY3
UniRef90 UniRef90_F4DPU9

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) -3.90
Kyte-Doolittle Hydrophobicity Value -0.106
Molecular Weight (kDa) 8.3
Isoelectric Point (pI) 4.38

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in one genus

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001565 (374 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_3380

Human Homologs

References

No references are associated with this feature.