Pseudomonas mendocina NK-01, MDS_3368

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_3368
Name
Replicon chromosome
Genomic location 3725931 - 3727343 (+ strand)

Cross-References

RefSeq YP_004381151.1
GI 330504282
Entrez 10458150
INSDC AEB59399.1
NCBI Locus Tag MDS_3368
UniParc UPI000206E322
UniProtKB Acc F4DPT7
UniProtKB ID F4DPT7_PSEMN
UniRef100 UniRef100_F4DPT7
UniRef50 UniRef50_Q4KCQ9
UniRef90 UniRef90_W6QVD8

Product

Feature Type CDS
Coding Frame 1
Product Name
GntR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) 5.91
Kyte-Doolittle Hydrophobicity Value -0.075
Molecular Weight (kDa) 52.1
Isoelectric Point (pI) 8.16

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 609 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001567 (527 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_3368

Human Homologs

References

No references are associated with this feature.