Pseudomonas mendocina NK-01, MDS_3286

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_3286
Name
Replicon chromosome
Genomic location 3635205 - 3636641 (+ strand)

Cross-References

RefSeq YP_004381069.1
GI 330504200
Entrez 10458068
INSDC AEB59317.1
NCBI Locus Tag MDS_3286
UniParc UPI000206E08B
UniProtKB Acc F4DNX1
UniProtKB ID F4DNX1_PSEMN
UniRef100 UniRef100_F4DNX1
UniRef50 UniRef50_Q4KFI4
UniRef90 UniRef90_W6QVK4

Product

Feature Type CDS
Coding Frame 1
Product Name
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
Synonyms
Evidence for Translation
Charge (pH 7) 11.36
Kyte-Doolittle Hydrophobicity Value -0.146
Molecular Weight (kDa) 52.3
Isoelectric Point (pI) 9.87

Subcellular localization

Individual Mappings
Localization Confidence PMID
Periplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 245 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002541 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_3286

Human Homologs

References

No references are associated with this feature.