Pseudomonas mendocina NK-01, MDS_2100

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_2100
Name
Replicon chromosome
Genomic location 2312428 - 2312604 (- strand)

Cross-References

RefSeq YP_004379883.1
GI 330503014
Entrez 10456882
INSDC AEB58131.1
NCBI Locus Tag MDS_2100
UniParc UPI000206DD67
UniProtKB Acc F4DQF8
UniProtKB ID F4DQF8_PSEMN
UniRef100 UniRef100_F4DQF8
UniRef50 UniRef50_T2H4L7
UniRef90 UniRef90_A4XVJ6

Product

Feature Type CDS
Coding Frame 1
Product Name
cbb3-type cytochrome oxidase subunit
Synonyms
Evidence for Translation
Charge (pH 7) 0.98
Kyte-Doolittle Hydrophobicity Value -0.424
Molecular Weight (kDa) 6419.1
Isoelectric Point (pI) 9.18

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 49 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG008385 (847 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_2100

Human Homologs

References

No references are associated with this feature.