Pseudomonas mendocina NK-01, MDS_1080

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_1080
Name
Replicon chromosome
Genomic location 1186796 - 1187959 (- strand)

Cross-References

RefSeq YP_004378863.1
GI 330501994
Entrez 10455862
INSDC AEB57111.1
NCBI Locus Tag MDS_1080
UniParc UPI000206E78E
UniProtKB Acc F4DSY0
UniProtKB ID F4DSY0_PSEMN
UniRef100 UniRef100_F4DSY0
UniRef50 UniRef50_Q887Q0
UniRef90 UniRef90_A4XR31

Product

Feature Type CDS
Coding Frame 1
Product Name
type IV pilus assembly PilZ
Synonyms
Evidence for Translation
Charge (pH 7) 2.28
Kyte-Doolittle Hydrophobicity Value -0.091
Molecular Weight (kDa) 41686.1
Isoelectric Point (pI) 7.48

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown (This protein may have multiple localization sites) Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 4 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002124 (491 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_1080

Human Homologs

References

No references are associated with this feature.