Pseudomonas mendocina NK-01, MDS_0794

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_0794
Name
Replicon chromosome
Genomic location 872009 - 872287 (- strand)

Cross-References

RefSeq YP_004378577.1
GI 330501708
Entrez 10455576
INSDC AEB56825.1
NCBI Locus Tag MDS_0794
UniParc UPI000206EB66
UniProtKB Acc F4DPF1
UniProtKB ID F4DPF1_PSEMN
UniRef100 UniRef100_F4DPF1
UniRef50 UniRef50_Q5QVV0
UniRef90 UniRef90_U3B948

Product

Feature Type CDS
Coding Frame 1
Product Name
DNA-binding protein fis
Synonyms
Evidence for Translation
Charge (pH 7) -1.05
Kyte-Doolittle Hydrophobicity Value -0.487
Molecular Weight (kDa) 10260.6
Isoelectric Point (pI) 6.51

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 197 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004482 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_0794

Human Homologs

References

No references are associated with this feature.