Pseudomonas mendocina NK-01, MDS_0568

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_0568
Name
Replicon chromosome
Genomic location 607151 - 608830 (- strand)

Cross-References

RefSeq YP_004378351.1
GI 330501482
Entrez 10455350
INSDC AEB56599.1
NCBI Locus Tag MDS_0568
UniParc UPI000067C6C9
UniProtKB Acc F4DMF0
UniProtKB ID F4DMF0_PSEMN
UniRef100 UniRef100_F4DMF0
UniRef50 UniRef50_P26496
UniRef90 UniRef90_W6QSQ8

Product

Feature Type CDS
Coding Frame 1
Product Name
poly(R)-hydroxyalkanoic acid synthase, class II
Synonyms
Evidence for Translation
Charge (pH 7) -0.08
Kyte-Doolittle Hydrophobicity Value -0.313
Molecular Weight (kDa) 62.4
Isoelectric Point (pI) 6.99

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 172 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004658 (934 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_0568

Human Homologs

References

No references are associated with this feature.