Pseudomonas mendocina NK-01, MDS_0460

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_0460
Name
Replicon chromosome
Genomic location 486729 - 487625 (- strand)

Cross-References

RefSeq YP_004378243.1
GI 330501374
Entrez 10455242
INSDC AEB56491.1
NCBI Locus Tag MDS_0460
UniParc UPI000206E8EA
UniProtKB Acc F4DZR3
UniProtKB ID F4DZR3_PSEMN
UniRef100 UniRef100_F4DZR3
UniRef50 UniRef50_A0A031MD39
UniRef90 UniRef90_A4XPA8

Product

Feature Type CDS
Coding Frame 1
Product Name
TonB family protein
Synonyms
Evidence for Translation
Charge (pH 7) 2.73
Kyte-Doolittle Hydrophobicity Value -0.520
Molecular Weight (kDa) 32.8
Isoelectric Point (pI) 9.24

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 94 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000397 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_0460

Human Homologs

References

No references are associated with this feature.