Pseudomonas mendocina NK-01, MDS_0172

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_0172
Name
Replicon chromosome
Genomic location 184523 - 184813 (+ strand)

Cross-References

RefSeq YP_004377955.1
GI 330501086
Entrez 10454954
INSDC AEB56203.1
NCBI Locus Tag MDS_0172
UniParc UPI000206EA78
UniProtKB Acc F4DWW1
UniProtKB ID F4DWW1_PSEMN
UniRef100 UniRef100_F4DWW1
UniRef50 UniRef50_A6VEW6
UniRef90 UniRef90_A4XNL4

Product

Feature Type CDS
Coding Frame 1
Product Name
cytochrome c5-like protein
Synonyms
Evidence for Translation
Charge (pH 7) 0.10
Kyte-Doolittle Hydrophobicity Value -0.086
Molecular Weight (kDa) 10.3
Isoelectric Point (pI) 7.13

Subcellular localization

Individual Mappings
Localization Confidence PMID
Periplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 95 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004897 (786 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_0172

Human Homologs

References

No references are associated with this feature.