Pseudomonas aeruginosa AZPAE14809, NR28_RS28055
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas aeruginosa AZPAE14809
GCF_000794995.1|latest |
| Locus Tag |
NR28_RS28055
|
| Name |
|
| Replicon | contig_36 |
| Genomic location | 41220 - 41684 (- strand) |
Cross-References
| RefSeq | WP_023911486.1 |
| GI | 565827143 |
| NCBI Locus Tag | NR28_RS28055 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
type VI secretion protein
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -0.56 |
| Kyte-Doolittle Hydrophobicity Value | -0.173 |
| Molecular Weight (kDa) | 16.9 |
| Isoelectric Point (pI) | 6.53 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
PDB 3D Structures
| Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
| 3ZHN | TOXIN | 12/22/12 | Crystal structure of the T6SS lipoprotein TssJ1 from Pseudomonas aeruginosa | PSEUDOMONAS AERUGINOSA | 1.4 | X-RAY DIFFRACTION | 99.2 |
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000079 (812 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: NR28_RS28055
Search term: type VI secretion protein
|
Human Homologs
References
No references are associated with this feature.