Pseudomonas aeruginosa AZPAE14809, NR28_RS27730

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas aeruginosa AZPAE14809
GCF_000794995.1|latest
Locus Tag
NR28_RS27730
Name
Replicon contig_35
Genomic location 1538 - 2251 (- strand)

Cross-References

RefSeq WP_003118960.1
GI 489210115
NCBI Locus Tag NR28_RS27730

Product

Feature Type CDS
Coding Frame 1
Product Name
LuxR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) -4.35
Kyte-Doolittle Hydrophobicity Value -0.141
Molecular Weight (kDa) 27.3
Isoelectric Point (pI) 5.91

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
3SZT TRANSCRIPTION 07/19/11 Quorum Sensing Control Repressor, QscR, Bound to N-3-oxo-dodecanoyl-L-Homoserine Lactone Pseudomonas aeruginosa 2.55 X-RAY DIFFRACTION 100.0
6CC0 TRANSCRIPTION 02/05/18 Crystal structure of QscR bound to C12-homoserine lactone Pseudomonas aeruginosa 2.5 X-RAY DIFFRACTION 100.0
6CBQ transcription/agonist 02/05/18 Crystal structure of QscR bound to agonist S3 Pseudomonas aeruginosa 2.8 X-RAY DIFFRACTION 100.0

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001096 (1439 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: NR28_RS27730

Human Homologs

References

No references are associated with this feature.