Pseudomonas stutzeri DSM 4166, PSTAA_0091 (rfbB-2)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas stutzeri DSM 4166
GCF_000195105.1|latest
Locus Tag
PSTAA_0091
Name
rfbB-2
Replicon chromosome
Genomic location 103967 - 105037 (- strand)

Cross-References

RefSeq YP_005936755.1
GI 386018731
Entrez 12527232
INSDC AEA82013.1
NCBI Locus Tag PSTAA_0091
UniParc UPI0002047402
UniProtKB Acc F2MV78
UniProtKB ID F2MV78_PSEU6
UniRef100 UniRef100_F2MV78
UniRef50 UniRef50_P27830
UniRef90 UniRef90_A4VFP1

Product

Feature Type CDS
Coding Frame 1
Product Name
dTDP-glucose 4,6-dehydratase
Synonyms
Evidence for Translation
Charge (pH 7) -12.19
Kyte-Doolittle Hydrophobicity Value -0.340
Molecular Weight (kDa) 40164.8
Isoelectric Point (pI) 5.15

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 644 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004752 (533 members)
Putative Inparalogs 1 predicted inparalogs
hypothetical protein (PSTAA_3923) 61.6% identity

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSTAA_0091
Search term: rfbB-2

Human Homologs

Ensembl 110, assembly GRCh38.p14
UDP-glucuronate decarboxylase 1 [Source:HGNC Symbol;Acc:HGNC:17729]
E-value: 3.4e-26
Percent Identity: 26.5
Ensembl 110, assembly GRCh38.p14
UDP-glucuronate decarboxylase 1 [Source:HGNC Symbol;Acc:HGNC:17729]
E-value: 3.4e-26
Percent Identity: 26.5

References

No references are associated with this feature.