Pseudomonas stutzeri ATCC 17588 = LMG 11199, PSTAB_0307

Gene Feature Overview

Strain	Pseudomonas stutzeri ATCC 17588 = LMG 11199 - Assembly GCF_000219605.1 GCF_000219605.1|latest
Locus Tag	PSTAB_0307
Name
Replicon	chromosome
Genomic location	345901 - 348219 (- strand)

Cross-References

RefSeq	YP_004712677.1
GI	339492384
Entrez	10941350
INSDC	AEJ03588.1
NCBI Locus Tag	PSTAB_0307
UniParc	UPI000215D440
UniProtKB Acc	F8H640
UniProtKB ID	F8H640_PSEUT
UniRef100	UniRef100_F8H640
UniRef50	UniRef50_Q45388
UniRef90	UniRef90_A0A098FWH1

Product

Feature Type	CDS
Coding Frame	1
Product Name	S1 RNA-binding domain-containing protein
Synonyms
Evidence for Translation
Charge (pH 7)	-5.16
Kyte-Doolittle Hydrophobicity Value	-0.299
Molecular Weight (kDa)	84273.2
Isoelectric Point (pI)	6.29

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 594 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG004785 (532 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSTAB_0307 Search term: S1 RNA-binding domain-containing protein

Human Homologs

Ensembl 110, assembly GRCh38.p14

ENSP00000263736 S1 RNA binding domain 1 [Source:HGNC Symbol;Acc:HGNC:25521] E-value: 4.0e-101 Percent Identity: 33.8

References