Pseudomonas stutzeri A1501, PST_3966

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas stutzeri A1501
GCF_000013785.1|latest
Locus Tag
PST_3966
Name
Replicon chromosome
Genomic location 4302961 - 4303650 (+ strand)

Cross-References

RefSeq YP_001174431.1
GI 146284278
Entrez 5096927
INSDC ABP81589.1
NCBI Locus Tag PST_3966
UniParc UPI00014FF2A1
UniProtKB Acc A4VRI8
UniProtKB ID A4VRI8_PSEU5
UniRef100 UniRef100_A4VRI8
UniRef50 UniRef50_P52055
UniRef90 UniRef90_A4VRI8

Product

Feature Type CDS
Coding Frame 1
Product Name
TIM-barrel fold family protein
Synonyms
Evidence for Translation
Charge (pH 7) -1.37
Kyte-Doolittle Hydrophobicity Value -0.212
Molecular Weight (kDa) 25.0
Isoelectric Point (pI) 6.29

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 566 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000385 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PST_3966

Human Homologs

Ensembl 110, assembly GRCh38.p14
pyridoxal phosphate binding protein [Source:HGNC Symbol;Acc:HGNC:9457]
E-value: 2.0e-27
Percent Identity: 38.7

References

No references are associated with this feature.