Pseudomonas stutzeri A1501, PST_3306 (pnp)

Gene Feature Overview

Strain	Pseudomonas stutzeri A1501 GCF_000013785.1|latest
Locus Tag	PST_3306
Name	pnp
Replicon	chromosome
Genomic location	3578587 - 3580692 (- strand)

Cross-References

RefSeq	YP_001173779.1
GI	146283626
Entrez	5096267
INSDC	ABP80937.1
NCBI Locus Tag	PST_3306
UniParc	UPI00014FEFE3
UniProtKB Acc	A4VPN6
UniProtKB ID	PNP_PSEU5
UniRef100	UniRef100_A4VPN6
UniRef50	UniRef50_P41121
UniRef90	UniRef90_A4XYD6

Product

Feature Type	CDS
Coding Frame	1
Product Name	polynucleotide phosphorylase/polyadenylase
Synonyms
Evidence for Translation
Charge (pH 7)	-18.13
Kyte-Doolittle Hydrophobicity Value	-0.082
Molecular Weight (kDa)	75.2
Isoelectric Point (pI)	4.88

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 663 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG004385 (536 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PST_3306 Search term: pnp Search term: polynucleotide phosphorylase/polyadenylase

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000400646 polyribonucleotide nucleotidyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:23166] E-value: 1.0e-111 Percent Identity: 36.1
Ensembl 110, assembly GRCh38.p14	ENSP00000393953 polyribonucleotide nucleotidyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:23166] E-value: 1.0e-111 Percent Identity: 36.1

References