Pseudomonas stutzeri A1501, PST_1857 (ligA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas stutzeri A1501
GCF_000013785.1|latest
Locus Tag
PST_1857
Name
ligA
Replicon chromosome
Genomic location 2007649 - 2010057 (+ strand)

Cross-References

RefSeq YP_001172373.1
GI 146282220
EC Number 6.5.1.2
Entrez 5097941
INSDC ABP79531.1
NCBI Locus Tag PST_1857
UniParc UPI000162784A
UniProtKB Acc A4VKN0
UniProtKB ID DNLJ_PSEU5
UniRef100 UniRef100_A4VKN0
UniRef50 UniRef50_Q9KTD1
UniRef90 UniRef90_A4VKN0

Product

Feature Type CDS
Coding Frame 1
Product Name
NAD-dependent DNA ligase LigA
Synonyms
Evidence for Translation
Charge (pH 7) -14.90
Kyte-Doolittle Hydrophobicity Value -0.232
Molecular Weight (kDa) 87722.8
Isoelectric Point (pI) 5.61

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 599 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003829 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PST_1857
Search term: ligA

Human Homologs

References

No references are associated with this feature.