Pseudomonas stutzeri A1501, PST_0278
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas stutzeri A1501
GCF_000013785.1|latest |
| Locus Tag |
PST_0278
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 320898 - 323216 (- strand) |
Cross-References
| RefSeq | YP_001170826.1 |
| GI | 146280673 |
| Entrez | 5095050 |
| NCBI Locus Tag | PST_0278 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
S1 RNA-binding domain-containing protein
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -5.13 |
| Kyte-Doolittle Hydrophobicity Value | -0.303 |
| Molecular Weight (kDa) | 84185.0 |
| Isoelectric Point (pI) | 6.29 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 594 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG004785 (532 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PST_0278
Search term: S1 RNA-binding domain-containing protein
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
S1 RNA binding domain 1 [Source:HGNC Symbol;Acc:HGNC:25521]
E-value:
6.9e-101
Percent Identity:
33.8
|
References
No references are associated with this feature.