Pseudomonas entomophila L48, PSEEN2767 (ligD)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas entomophila L48
GCF_000026105.1|latest
Locus Tag
PSEEN2767
Name
ligD
Replicon chromosome
Genomic location 2904721 - 2907183 (- strand)

Cross-References

RefSeq YP_608347.1
GI 104781849
EC Number 6.5.1.1
Entrez 4086175
INSDC CAK15551.1
UniParc UPI0000D7885D
UniProtKB Acc Q1I9X2
UniProtKB ID Q1I9X2_PSEE4
UniRef100 UniRef100_Q1I9X2
UniRef50 UniRef50_A0A089WV65
UniRef90 UniRef90_Q1I9X2

Product

Feature Type CDS
Coding Frame 1
Product Name
ATP-dependent DNA ligase
Synonyms
Evidence for Translation
Charge (pH 7) 9.21
Kyte-Doolittle Hydrophobicity Value -0.444
Molecular Weight (kDa) 91653.6
Isoelectric Point (pI) 8.62

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 292 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003336 (490 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSEEN2767
Search term: ligD

Human Homologs

References

No references are associated with this feature.