Pseudomonas aeruginosa AZPAE12146, NQ07_RS15040

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas aeruginosa AZPAE12146
GCF_000796765.1|latest
Locus Tag
NQ07_RS15040
Name
Replicon contig_14
Genomic location 94070 - 95122 (+ strand)

Cross-References

RefSeq WP_033973003.1
GI 730290166
NCBI Locus Tag NQ07_RS15040

Product

Feature Type CDS
Coding Frame 1
Product Name
porin
Synonyms
Evidence for Translation
Charge (pH 7) -11.67
Kyte-Doolittle Hydrophobicity Value -0.435
Molecular Weight (kDa) 37.6
Isoelectric Point (pI) 4.75

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
5U1H PEPTIDE BINDING PROTEIN 11/28/16 Crystal structure of the C-terminal peptidoglycan binding domain of OprF (PA1777) from Pseudomonas aeruginosa Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) 1.5 X-RAY DIFFRACTION 100.0
4RLC TRANSPORT PROTEIN 10/16/14 Crystal structure of the N-terminal beta-barrel domain of Pseudomonas aeruginosa OprF Pseudomonas aeruginosa 1.6 X-RAY DIFFRACTION 99.4

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003618 (537 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: NQ07_RS15040
Search term: porin

Human Homologs

References

No references are associated with this feature.