Pseudomonas aeruginosa PA7, PSPA7_5945

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas aeruginosa PA7
GCF_000017205.1|latest
Locus Tag
PSPA7_5945
Name
Replicon chromosome
Genomic location 6137568 - 6139907 (+ strand)

Cross-References

RefSeq YP_001351262.1
GI 152988034
Entrez 5357197
INSDC ABR85217.1
NCBI Locus Tag PSPA7_5945
UniParc UPI0000D7261C
UniProtKB Acc A6VDX7
UniProtKB ID A6VDX7_PSEA7
UniRef100 UniRef100_A6VDX7
UniRef50 UniRef50_Q45388
UniRef90 UniRef90_Q9HTY8

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) -4.13
Kyte-Doolittle Hydrophobicity Value -0.277
Molecular Weight (kDa) 84904.1
Isoelectric Point (pI) 6.42

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
2OCE STRUCTURAL GENOMICS, UNKNOWN FUNCTION 12/20/06 Crystal structure of Tex family protein PA5201 from Pseudomonas aeruginosa Pseudomonas aeruginosa PAO1 3.1 X-RAY DIFFRACTION 98.6
3BZC RNA BINDING PROTEIN 01/17/08 Crystal Structure of the Tex protein from Pseudomonas aeruginosa, crystal form I Pseudomonas aeruginosa 2.27 X-RAY DIFFRACTION 98.7
3BZK RNA BINDING PROTEIN 01/18/08 Crystal Structure of the Tex protein from Pseudomonas aeruginosa, crystal form 2 Pseudomonas aeruginosa 2.3 X-RAY DIFFRACTION 98.7

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 593 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004785 (532 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPA7_5945

Human Homologs

Ensembl 110, assembly GRCh38.p14
S1 RNA binding domain 1 [Source:HGNC Symbol;Acc:HGNC:25521]
E-value: 3.8e-99
Percent Identity: 33.8

References

No references are associated with this feature.