Pseudomonas aeruginosa PA7, PSPA7_5862 (secB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas aeruginosa PA7
GCF_000017205.1|latest
Locus Tag
PSPA7_5862
Name
secB
Replicon chromosome
Genomic location 6059132 - 6059623 (- strand)

Cross-References

RefSeq YP_001351181.1
GI 152987010
Entrez 5356610
INSDC ABR84193.1
NCBI Locus Tag PSPA7_5862
UniParc UPI00000C5F18
UniProtKB Acc A6VDP6
UniProtKB ID SECB_PSEA7
UniRef100 UniRef100_A6VDP6
UniRef50 UniRef50_Q48C90
UniRef90 UniRef90_A6VDP6

Product

Feature Type CDS
Coding Frame 1
Product Name
preprotein translocase subunit SecB
Synonyms
Evidence for Translation
Charge (pH 7) -8.80
Kyte-Doolittle Hydrophobicity Value -0.191
Molecular Weight (kDa) 18.1
Isoelectric Point (pI) 4.21

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 216 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004721 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPA7_5862
Search term: secB

Human Homologs

References

No references are associated with this feature.