Pseudomonas aeruginosa PA7, PSPA7_3918 (speB1)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas aeruginosa PA7
GCF_000017205.1|latest
Locus Tag
PSPA7_3918
Name
speB1
Replicon chromosome
Genomic location 4055332 - 4056291 (+ strand)

Cross-References

RefSeq YP_001349272.1
GI 152984568
EC Number 3.5.3.11
Entrez 5358491
NCBI Locus Tag PSPA7_3918

Product

Feature Type CDS
Coding Frame 1
Product Name
guanidinobutyrase
Synonyms
Evidence for Translation
Charge (pH 7) -10.74
Kyte-Doolittle Hydrophobicity Value -0.050
Molecular Weight (kDa) 34.8
Isoelectric Point (pI) 5.07

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
3NIO HYDROLASE 06/16/10 Crystal structure of Pseudomonas aeruginosa guanidinobutyrase Pseudomonas aeruginosa 2 X-RAY DIFFRACTION 98.7

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 434 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001341 (475 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPA7_3918
Search term: speB1
Search term: guanidinobutyrase

Human Homologs

Ensembl 110, assembly GRCh38.p14
agmatinase [Source:HGNC Symbol;Acc:HGNC:18407]
E-value: 3.6e-112
Percent Identity: 61.0

References

No references are associated with this feature.