Pseudomonas aeruginosa PA7, PSPA7_2267

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas aeruginosa PA7
GCF_000017205.1|latest
Locus Tag
PSPA7_2267
Name
Replicon chromosome
Genomic location 2323775 - 2324653 (- strand)

Cross-References

RefSeq YP_001347639.1
GI 152987018
Entrez 5355918
INSDC ABR84201.1
NCBI Locus Tag PSPA7_2267
UniParc UPI0000D73645
UniProtKB Acc A6V3K4
UniProtKB ID A6V3K4_PSEA7
UniRef100 UniRef100_A6V3K4
UniRef50 UniRef50_D0CG44
UniRef90 UniRef90_W0YSQ8

Product

Feature Type CDS
Coding Frame 1
Product Name
putative short-chain dehydrogenase
Synonyms
Evidence for Translation
Charge (pH 7) 1.10
Kyte-Doolittle Hydrophobicity Value -0.020
Molecular Weight (kDa) 30630.5
Isoelectric Point (pI) 7.32

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
6LLN OXIDOREDUCTASE 12/23/19 citronellol catabolism dehydrogenase (AtuB) [Pseudomonas aeruginosa PAO1] Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) 1.8 X-RAY DIFFRACTION 97.9

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 650 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002686 (393 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPA7_2267

Human Homologs

Ensembl 110, assembly GRCh38.p14
peroxisomal trans-2-enoyl-CoA reductase [Source:HGNC Symbol;Acc:HGNC:18281]
E-value: 8.8e-49
Percent Identity: 41.4

References

No references are associated with this feature.