Pseudomonas aeruginosa PA7, PSPA7_0379 (speB2)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas aeruginosa PA7
GCF_000017205.1|latest
Locus Tag
PSPA7_0379
Name
speB2
Replicon chromosome
Genomic location 386439 - 387395 (+ strand)

Cross-References

RefSeq YP_001345774.1
GI 152984033
EC Number 3.5.3.11
Entrez 5356084
NCBI Locus Tag PSPA7_0379

Product

Feature Type CDS
Coding Frame 1
Product Name
agmatinase
Synonyms
Evidence for Translation
Charge (pH 7) -7.89
Kyte-Doolittle Hydrophobicity Value -0.050
Molecular Weight (kDa) 34307.7
Isoelectric Point (pI) 5.37

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
3NIQ HYDROLASE 06/16/10 Crystal structure of Pseudomonas aeruginosa guanidinopropionase Pseudomonas aeruginosa 2.07 X-RAY DIFFRACTION 97.4
3NIP HYDROLASE 06/16/10 Crystal structure of Pseudomonas aeruginosa guanidinopropionase complexed with 1,6-diaminohexane Pseudomonas aeruginosa 2.5 X-RAY DIFFRACTION 97.4

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 439 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000285 (312 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPA7_0379
Search term: speB2
Search term: agmatinase

Human Homologs

Ensembl 110, assembly GRCh38.p14
agmatinase [Source:HGNC Symbol;Acc:HGNC:18407]
E-value: 6.4e-77
Percent Identity: 46.2

References

No references are associated with this feature.