Pseudomonas aeruginosa UCBPP-PA14, PA14_69690 (dapF)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas aeruginosa UCBPP-PA14 (Lee et al., 2006)
GCF_000014625.1|latest
Locus Tag
PA14_69690
Name
dapF
Replicon chromosome
Genomic location 6215945 - 6216775 (+ strand)
Transposon Mutants 1 transposon mutants in UCBPP-PA14

Cross-References

RefSeq YP_793752.1
GI 116053427
EC Number 5.1.1.7
Entrez 4385062
INSDC ABJ14663.1
NCBI Locus Tag PA14_69690
UniParc UPI0000397066
UniProtKB Acc Q02E84
UniProtKB ID DAPF_PSEAB
UniRef100 UniRef100_A6VE52
UniRef50 UniRef50_Q88CF3
UniRef90 UniRef90_B7V5G9

Product

Feature Type CDS
Coding Frame 1
Product Name
diaminopimelate epimerase
Synonyms
Evidence for Translation
Charge (pH 7) 2.28
Kyte-Doolittle Hydrophobicity Value -0.213
Molecular Weight (kDa) 30.3
Isoelectric Point (pI) 7.67

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 553 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004856 (537 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA14_69690
Search term: dapF

Human Homologs

References

No references are associated with this feature.