Pseudomonas aeruginosa UCBPP-PA14, PA14_54600

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas aeruginosa UCBPP-PA14 (Lee et al., 2006)
GCF_000014625.1|latest
Locus Tag
PA14_54600
Name
Replicon chromosome
Genomic location 4840050 - 4840871 (- strand)
Transposon Mutants 1 transposon mutants in UCBPP-PA14
Transposon Mutants in orthologs 3 transposon mutants in orthologs

Cross-References

RefSeq YP_792536.1
GI 116048664
Entrez 4385296
INSDC ABJ09900.1
NCBI Locus Tag PA14_54600
UniParc UPI000045D02C
UniProtKB Acc Q02HQ0
UniProtKB ID Q02HQ0_PSEAB
UniRef100 UniRef100_Q02HQ0
UniRef50 UniRef50_A0A0B7DBN9
UniRef90 UniRef90_Q9I5I0

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) 20.21
Kyte-Doolittle Hydrophobicity Value -0.374
Molecular Weight (kDa) 32.0
Isoelectric Point (pI) 10.59

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AMR gene predictions from CARD database

Identified using the Resistance Gene Identifier (RGI)

Model Name Definition Accession Model Type (?) SNP Cutoff Bit Score Percent Identity CARD Version
vanW gene in vanG cluster Also known as vanWG, is a vanW variant found in the vanG gene cluster. [PMID:16723588] ARO:3002965 protein homolog model Strict 143.7 32.33 3.2.5

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 104 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000723 (309 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA14_54600

Human Homologs

References

No references are associated with this feature.