Pseudomonas aeruginosa UCBPP-PA14, PA14_37260

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas aeruginosa UCBPP-PA14 (Lee et al., 2006)
GCF_000014625.1|latest
Locus Tag
PA14_37260
Name
Replicon chromosome
Genomic location 3318312 - 3319541 (+ strand)
Transposon Mutants 1 transposon mutants in UCBPP-PA14
Transposon Mutants in orthologs 2 transposon mutants in orthologs

Cross-References

RefSeq YP_791133.1
GI 116050053
Entrez 4385800
INSDC ABJ11289.1
NCBI Locus Tag PA14_37260
UniParc UPI000045D277
UniProtKB Acc Q02LQ3
UniProtKB ID Q02LQ3_PSEAB
UniRef100 UniRef100_S0I933
UniRef50 UniRef50_W6QYC2
UniRef90 UniRef90_Q9I202

Product

Feature Type CDS
Coding Frame 1
Product Name
porin
Synonyms
Evidence for Translation
Charge (pH 7) -4.31
Kyte-Doolittle Hydrophobicity Value -0.257
Molecular Weight (kDa) 44.2
Isoelectric Point (pI) 5.94

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
3SZV MEMBRANE PROTEIN 07/19/11 Crystal structure of Pseudomonas aeruginosa OccK3 (OpdO) Pseudomonas aeruginosa 1.45 X-RAY DIFFRACTION 99.5
2Y0K TRANSPORT PROTEIN 12/03/10 Crystal Structure of Pseudomonas Aeruginosa OpdO PSEUDOMONAS AERUGINOSA 2.295 X-RAY DIFFRACTION 99.5

Virulence Evidence

Source 1
Database Victors : 4428
Category
Evidence ECO:0000015
mutant phenotype evidence
Host Organism Drosophila melanogaster
Notes
Reference 18591226
Source 2
Database Victors : 4428
Category
Evidence ECO:0000015
mutant phenotype evidence
Host Organism Mus musculus
Notes
Reference 18591226

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 25 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003356 (323 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA14_37260
Search term: porin

Human Homologs

References

No references are associated with this feature.