Pseudomonas aeruginosa UCBPP-PA14, PA14_27640 (rebP1)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas aeruginosa UCBPP-PA14 (Lee et al., 2006)
GCF_000014625.1|latest
Locus Tag
PA14_27640
Name
rebP1
Replicon chromosome
Genomic location 2396375 - 2396695 (- strand)
Transposon Mutants 1 transposon mutants in UCBPP-PA14

Cross-References

RefSeq YP_790355.1
GI 116050822
Entrez 4380866
INSDC ABJ12058.1
NCBI Locus Tag PA14_27640
UniParc UPI00000C06FC
UniProtKB Acc Q02NY1
UniProtKB ID Q02NY1_PSEAB
UniRef100 UniRef100_Q02NY1
UniRef50 UniRef50_Q8P6Q9
UniRef90 UniRef90_Q02NY1

Product

Feature Type CDS
Coding Frame 1
Product Name
RebP1
Product Name Confidence: Class 1
Synonyms protein associated with synthesis and assembly of refractile inclusion bodies
Evidence for Translation
Charge (pH 7) -4.78
Kyte-Doolittle Hydrophobicity Value 0.268
Molecular Weight (kDa) 11.0
Isoelectric Point (pI) 4.03

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 18 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG013937 (253 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA14_27640
Search term: rebP1
Search term: RebP1

Human Homologs

References

Pseudomonas aeruginosa PA14 produces R-bodies, extendable protein polymers with roles in host colonization and virulence.
Wang B, Lin YC, Vasquez-Rifo A, Jo J, Price-Whelan A, McDonald ST, Brown LM, Sieben C, Dietrich LEP
Nat Commun 2021 Jul 29;12(1):4613
PubMed ID: 34326342