Pseudomonas aeruginosa UCBPP-PA14, PA14_24080 (xcpY)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas aeruginosa UCBPP-PA14 (Lee et al., 2006)
GCF_000014625.1|latest
Locus Tag
PA14_24080
Name
xcpY
Replicon chromosome
Genomic location 2090660 - 2091808 (+ strand)
Transposon Mutants in orthologs 5 transposon mutants in orthologs

Cross-References

RefSeq YP_790077.1
GI 116051092
Entrez 4381096
INSDC ABJ12328.1
NCBI Locus Tag PA14_24080
UniParc UPI0000E449D1
UniProtKB Acc Q02PQ9
UniProtKB ID Q02PQ9_PSEAB
UniRef100 UniRef100_Q02PQ9
UniRef50 UniRef50_P25060
UniRef90 UniRef90_P25060

Product

Feature Type CDS
Coding Frame 1
Product Name
general secretion pathway protein L
Synonyms
Evidence for Translation
Charge (pH 7) -9.96
Kyte-Doolittle Hydrophobicity Value -0.021
Molecular Weight (kDa) 41.3
Isoelectric Point (pI) 4.81

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
5N7L PROTEIN TRANSPORT 02/20/17 Crystal structure of the periplasmic domain of XcpY, tI crystal form. Pseudomonas aeruginosa PAO1 2.501 X-RAY DIFFRACTION 100.0
6GHU TRANSPORT PROTEIN 05/09/18 Crystal structure of the periplasmic domain of XcpY, oP crystal form. Pseudomonas aeruginosa 2 X-RAY DIFFRACTION 100.0

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 43 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002496 (352 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA14_24080
Search term: xcpY

Human Homologs

References

No references are associated with this feature.