Pseudomonas syringae pv. syringae B728a, Psyr_4396

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas syringae pv. syringae B728a (Feil et al., 2005)
GCF_000012245.1|latest
Locus Tag
Psyr_4396
Name
Replicon chromosome
Genomic location 5258246 - 5258980 (+ strand)

Cross-References

RefSeq YP_237464.1
GI 66047623
Entrez 3369936
INSDC AAY39426.1
NCBI Locus Tag Psyr_4396
UniParc UPI000039545E
UniProtKB Acc Q4ZN46
UniProtKB ID Q4ZN46_PSEU2
UniRef100 UniRef100_Q4ZN46
UniRef50 UniRef50_G8Q285
UniRef90 UniRef90_S3MPM5

Product

Feature Type CDS
Coding Frame 1
Product Name
TPR repeat-containing protein
Synonyms
Evidence for Translation
Charge (pH 7) 1.63
Kyte-Doolittle Hydrophobicity Value -0.292
Molecular Weight (kDa) 26.5
Isoelectric Point (pI) 8.07

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown (This protein may have multiple localization sites) Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 26 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003900 (425 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psyr_4396

Human Homologs

References

No references are associated with this feature.