Pseudomonas syringae pv. syringae B728a, Psyr_4072 (groEL)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas syringae pv. syringae B728a (Feil et al., 2005)
GCF_000012245.1|latest
Locus Tag
Psyr_4072
Name
groEL
Replicon chromosome
Genomic location 4855526 - 4857169 (- strand)

Cross-References

RefSeq YP_237140.1
GI 66047299
Entrez 3369608
INSDC AAY39102.1
NCBI Locus Tag Psyr_4072
UniParc UPI000050DA9E
UniProtKB Acc Q4ZP20
UniProtKB ID CH60_PSEU2
UniRef100 UniRef100_Q4ZP20
UniRef50 UniRef50_O66200
UniRef90 UniRef90_Q4K764

Product

Feature Type CDS
Coding Frame 1
Product Name
chaperonin GroEL
Synonyms
Evidence for Translation
Charge (pH 7) -13.27
Kyte-Doolittle Hydrophobicity Value -0.036
Molecular Weight (kDa) 57.2
Isoelectric Point (pI) 4.80

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 666 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003976 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psyr_4072
Search term: groEL
Search term: chaperonin GroEL

Human Homologs

Ensembl 110, assembly GRCh38.p14
heat shock protein family D (Hsp60) member 1 [Source:HGNC Symbol;Acc:HGNC:5261]
E-value: 1.8e-148
Percent Identity: 52.0
Ensembl 110, assembly GRCh38.p14
heat shock protein family D (Hsp60) member 1 [Source:HGNC Symbol;Acc:HGNC:5261]
E-value: 1.8e-148
Percent Identity: 52.0
Ensembl 110, assembly GRCh38.p14
heat shock protein family D (Hsp60) member 1 [Source:HGNC Symbol;Acc:HGNC:5261]
E-value: 1.8e-148
Percent Identity: 52.0
Ensembl 110, assembly GRCh38.p14
heat shock protein family D (Hsp60) member 1 [Source:HGNC Symbol;Acc:HGNC:5261]
E-value: 1.8e-148
Percent Identity: 52.0
Ensembl 110, assembly GRCh38.p14
heat shock protein family D (Hsp60) member 1 [Source:HGNC Symbol;Acc:HGNC:5261]
E-value: 1.8e-148
Percent Identity: 52.0
Ensembl 110, assembly GRCh38.p14
heat shock protein family D (Hsp60) member 1 [Source:HGNC Symbol;Acc:HGNC:5261]
E-value: 1.8e-148
Percent Identity: 52.0
Ensembl 110, assembly GRCh38.p14
heat shock protein family D (Hsp60) member 1 [Source:HGNC Symbol;Acc:HGNC:5261]
E-value: 1.8e-148
Percent Identity: 52.0
Ensembl 110, assembly GRCh38.p14
heat shock protein family D (Hsp60) member 1 [Source:HGNC Symbol;Acc:HGNC:5261]
E-value: 1.8e-148
Percent Identity: 52.0
Ensembl 110, assembly GRCh38.p14
heat shock protein family D (Hsp60) member 1 [Source:HGNC Symbol;Acc:HGNC:5261]
E-value: 1.8e-148
Percent Identity: 52.0

References

No references are associated with this feature.