Pseudomonas simiae WCS417, PS417_RS07500
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas simiae WCS417
GCF_000698265.1|latest |
| Locus Tag |
PS417_RS07500
|
| NCBI Old Locus Tag | PS417_20865 |
| Name |
Synonym: PS417_20865 |
| Replicon | chromosome |
| Genomic location | 4531216 - 4533573 (- strand) |
Cross-References
| RefSeq | WP_010208527.1 |
| GI | 497894371 |
| EC Number | 6.5.1.2 |
| NCBI Locus Tag | PS417_RS07500 |
| NCBI Old Locus Tag | PS417_20865 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
NAD-dependent DNA ligase LigA
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -15.19 |
| Kyte-Doolittle Hydrophobicity Value | -0.183 |
| Molecular Weight (kDa) | 85.7 |
| Isoelectric Point (pI) | 5.74 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results | Analysis not done |
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG003829 (535 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PS417_RS07500
Search term: NAD-dependent DNA ligase LigA
|
Human Homologs
References
No references are associated with this feature.