Pseudomonas simiae WCS417, PS417_RS23425
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas simiae WCS417
GCF_000698265.1|latest |
| Locus Tag |
PS417_RS23425
|
| NCBI Old Locus Tag | PS417_04360 |
| Name |
Synonym: PS417_04360 |
| Replicon | chromosome |
| Genomic location | 973981 - 974553 (- strand) |
Cross-References
| RefSeq | WP_010213110.1 |
| GI | 497898954 |
| NCBI Locus Tag | PS417_RS23425 |
| NCBI Old Locus Tag | PS417_04360 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
lipopolysaccharide ABC transporter, permease protein LptC, putative
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -0.29 |
| Kyte-Doolittle Hydrophobicity Value | -0.394 |
| Molecular Weight (kDa) | 21.3 |
| Isoelectric Point (pI) | 6.81 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results | Analysis not done |
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG004048 (536 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PS417_RS23425
|
Human Homologs
References
No references are associated with this feature.