Pseudomonas syringae pv. syringae B728a, Psyr_3242

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas syringae pv. syringae B728a (Feil et al., 2005)
GCF_000012245.1|latest
Locus Tag
Psyr_3242
Name
Replicon chromosome
Genomic location 3881044 - 3882186 (+ strand)

Cross-References

RefSeq YP_236312.1
GI 66046471
EC Number 3.1.4.46
Entrez 3368769
INSDC AAY38274.1
NCBI Locus Tag Psyr_3242
UniParc UPI000050D9A6
UniProtKB Acc Q4ZRE8
UniProtKB ID Q4ZRE8_PSEU2
UniRef100 UniRef100_Q4ZRE8
UniRef50 UniRef50_D7I1J1
UniRef90 UniRef90_D7I1J1

Product

Feature Type CDS
Coding Frame 1
Product Name
glycerophosphodiester phosphodiesterase
Synonyms
Evidence for Translation
Charge (pH 7) -2.07
Kyte-Doolittle Hydrophobicity Value -0.336
Molecular Weight (kDa) 41.8
Isoelectric Point (pI) 6.53

Subcellular localization

Individual Mappings
Localization Confidence PMID
Periplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 388 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000339 (769 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psyr_3242

Human Homologs

References

No references are associated with this feature.