Pseudomonas sp. WCS358, PC358_RS21540

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas sp. WCS358
GCF_000731675.1|latest
Locus Tag
PC358_RS21540
NCBI Old Locus TagPC358_21855
Name
Synonym: PC358_21855
Replicon WCS358-Sc3
Genomic location 864413 - 865723 (- strand)

Cross-References

RefSeq WP_033702461.1
GI 727242508
INSDC KEY86411.1
NCBI Locus Tag PC358_RS21540
NCBI Old Locus Tag PC358_21855
UniParc UPI0004D48504
UniProtKB Acc A0A084C9D2
UniProtKB ID A0A084C9D2_9PSED
UniRef100 UniRef100_A0A084C9D2
UniRef50 UniRef50_Q4KKR1
UniRef90 UniRef90_Q1IH37

Product

Feature Type CDS
Coding Frame 1
Product Name
16S rRNA methyltransferase
Synonyms
Evidence for Translation
Charge (pH 7) -0.88
Kyte-Doolittle Hydrophobicity Value -0.099
Molecular Weight (kDa) 47.5
Isoelectric Point (pI) 6.84

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000017 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PC358_RS21540

Human Homologs

Ensembl 110, assembly GRCh38.p14
NOP2 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:7867]
E-value: 1.7e-24
Percent Identity: 30.7
Ensembl 110, assembly GRCh38.p14
NOP2 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:7867]
E-value: 1.7e-24
Percent Identity: 30.7
Ensembl 110, assembly GRCh38.p14
NOP2 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:7867]
E-value: 1.7e-24
Percent Identity: 30.7
Ensembl 110, assembly GRCh38.p14
NOP2 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:7867]
E-value: 1.7e-24
Percent Identity: 30.7
Ensembl 110, assembly GRCh38.p14
NOP2 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:7867]
E-value: 1.7e-24
Percent Identity: 30.7
Ensembl 110, assembly GRCh38.p14
NOP2 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:7867]
E-value: 1.7e-24
Percent Identity: 30.7

References

No references are associated with this feature.