Pseudomonas sp. WCS358, PC358_RS18780

Gene Feature Overview

Strain	Pseudomonas sp. WCS358 GCF_000731675.1|latest
Locus Tag	PC358_RS18780
NCBI Old Locus Tag	PC358_19080
Name	Synonym: PC358_19080
Replicon	WCS358-Sc3
Genomic location	236735 - 237610 (- strand)

Cross-References

RefSeq	WP_033701787.1
GI	727241834
INSDC	KEY85863.1
NCBI Locus Tag	PC358_RS18780
NCBI Old Locus Tag	PC358_19080
UniParc	UPI0004D41064
UniProtKB Acc	A0A084C7T4
UniProtKB ID	A0A084C7T4_9PSED
UniRef100	UniRef100_A0A084C7T4
UniRef50	UniRef50_G8Q4Y5
UniRef90	UniRef90_Q1I474

Product

Feature Type	CDS
Coding Frame	1
Product Name	ABC transporter
Synonyms
Evidence for Translation
Charge (pH 7)	-3.44
Kyte-Doolittle Hydrophobicity Value	0.025
Molecular Weight (kDa)	32.3
Isoelectric Point (pI)	6.17

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG004529 (504 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PC358_RS18780 Search term: ABC transporter

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000396789 ATP binding cassette subfamily A member 13 [Source:HGNC Symbol;Acc:HGNC:14638] E-value: 1.8e-14 Percent Identity: 25.3
Ensembl 110, assembly GRCh38.p14	ENSP00000442634 ATP binding cassette subfamily A member 13 [Source:HGNC Symbol;Acc:HGNC:14638] E-value: 1.8e-14 Percent Identity: 25.3
Ensembl 110, assembly GRCh38.p14	ENSP00000411096 ATP binding cassette subfamily A member 13 [Source:HGNC Symbol;Acc:HGNC:14638] E-value: 1.8e-14 Percent Identity: 25.3

References