Pseudomonas sp. WCS358, PC358_RS17900

Gene Feature Overview

Strain	Pseudomonas sp. WCS358 GCF_000731675.1|latest
Locus Tag	PC358_RS17900
NCBI Old Locus Tag	PC358_18190
Name	Synonym: PC358_18190
Replicon	WCS358-Sc3
Genomic location	40445 - 42550 (- strand)

Cross-References

RefSeq	WP_033701582.1
GI	727241575
INSDC	KEY85691.1
NCBI Locus Tag	PC358_RS17900
NCBI Old Locus Tag	PC358_18190
UniParc	UPI0004DA3644
UniProtKB Acc	A0A084C7B2
UniProtKB ID	A0A084C7B2_9PSED
UniRef100	UniRef100_A0A084C7B2
UniRef50	UniRef50_Q3IJ73
UniRef90	UniRef90_Q87WQ8

Product

Feature Type	CDS
Coding Frame	1
Product Name	polynucleotide phosphorylase/polyadenylase
Synonyms
Evidence for Translation
Charge (pH 7)	-18.14
Kyte-Doolittle Hydrophobicity Value	-0.028
Molecular Weight (kDa)	75.0
Isoelectric Point (pI)	4.87

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG004385 (536 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PC358_RS17900 Search term: polynucleotide phosphorylase/polyadenylase

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000400646 polyribonucleotide nucleotidyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:23166] E-value: 2.5e-113 Percent Identity: 36.3
Ensembl 110, assembly GRCh38.p14	ENSP00000393953 polyribonucleotide nucleotidyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:23166] E-value: 2.5e-113 Percent Identity: 36.3

References