Pseudomonas sp. WCS358, PC358_RS07940

Gene Feature Overview

Strain	Pseudomonas sp. WCS358 GCF_000731675.1|latest
Locus Tag	PC358_RS07940
NCBI Old Locus Tag	PC358_08100
Name	Synonym: PC358_08100
Replicon	WCS358-Sc1
Genomic location	1770696 - 1771670 (+ strand)

Cross-References

RefSeq	WP_033698704.1
GI	727238107
INSDC	KEY89088.1
NCBI Locus Tag	PC358_RS07940
NCBI Old Locus Tag	PC358_08100
UniParc	UPI0004D6DFA1
UniProtKB Acc	A0A084CH09
UniProtKB ID	A0A084CH09_9PSED
UniRef100	UniRef100_A0A084CH09
UniRef50	UniRef50_Q4KDP8
UniRef90	UniRef90_Q52209

Product

Feature Type	CDS
Coding Frame	1
Product Name	siderophore-interacting protein
Synonyms
Evidence for Translation
Charge (pH 7)	9.06
Kyte-Doolittle Hydrophobicity Value	-0.245
Molecular Weight (kDa)	35.9
Isoelectric Point (pI)	9.96

Subcellular localization

Individual Mappings	Localization Confidence PMID Periplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession	Header	Accession Date	Compound	Source	Resolution	Method	Percent Identity
6OVK	SIGNALING PROTEIN	05/08/19	Crystal Structure of the Pseudomonas capeferrum Anti-sigma Regulator PupR C-terminal Cell-surface Signaling Domain in Complex with the Outer Membrane Transporter PupB N-terminal Signaling Domain	Pseudomonas capeferrum	1.761	X-RAY DIFFRACTION	98.6
6OVM	SIGNALING PROTEIN	05/08/19	Crystal Structure of the Pseudomonas capeferrum Anti-sigma Regulator PupR C-terminal Cell-surface Signaling Domain in Complex with the Outer Membrane Transporter PupB N-terminal Signaling Domain (SeMet)	Pseudomonas capeferrum	1.6	X-RAY DIFFRACTION	98.6
5CAM	TRANSCRIPTION	06/29/15	Crystal Structure of the Cytoplasmic Domain of the Pseudomonas putida Anti-sigma Factor PupR (SeMet)	Pseudomonas putida	2.171	X-RAY DIFFRACTION	100.0
5COS	TRANSCRIPTION	07/20/15	Crystal Structure of the Cytoplasmic Domain of the Pseudomonas putida Anti-sigma Factor PupR	Pseudomonas sp. WCS358	2.019	X-RAY DIFFRACTION	100.0

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000462 (1708 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PC358_RS07940 Search term: siderophore-interacting protein

Human Homologs

References